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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015839212.1_cds_XP_016507217.1_20364
CDS Infomation

[gene=LOC107824922] [db_xref=GeneID:107824922] [protein=formamidopyrimidine-DNA glycosylase-like isoform X2] [protein_id=XP_016507217.1] [location=complement(join(24581..25120,25205..25239,25890..25989,26084..26161,26461..26511,26923..27048,27136..27204,27789..27846,28199..28250,29133..29361))] [gbkey=CDS]
Sequence

ATGCCGGAGCTTCCGGAGGTAGAGGCAGCTCGAAGAGCCATAGAGGATCACTGCGTAGGC
AAGAAAATCGTGAAAGCCATCATCGCCGATGATCCCAAGGTCATCGACGGCGTGTCTCTA
GATGATTTCAGAGCCTCTCTTGAGGGCAAAACCATCGTAGCTGCTAATCGCAAGGGAAAA
AACATGTGGATTGAGCTCGATTCCCCTCCTTTCCCTACTTTTCAGTTCGGAATGGCGGGT
GCTATATACATCAAAGGAGTTGCTGTTACAAAATATAAACGGTCTGCTGTAAAAGACGAC
GACGAGTGGCCTTCCAAGTATTCAAAGGTTTTCCTTGAGTTGGACGATGGTTTGGAGCTT
TCATTTACTGATAAGAGGCGGTTTGCCAGGGTGCGCTCTCTGAAAAATCCGGTTTCTGTT
CCTCCAATATCTGAACTTGGTCCTGATGCTCTGTTGGAGCCAATGACTGTAGATGAGTTC
TATAAAGCTTTCAGCAAGAAGAAGATTGGTGTTAAGGCTTTATTACTTGACCAGAGTTTT
ATTTCAGGAATTGGCAACTGGATTGCAGATGAAGTGCTATATCAGGCAAGAATCCATCCT
ATGCAGACTGCTTCTAGCATATCCAAGGAGGACTGTGCAACATTGCTGAAGTGCATCTAC
GAGGTTACAGAATTTGCGGTTGAAGTAGATGCCGACTGCAGCCGCTTCCCTTCTGAATGG
TTGTTTCATTACCGATGGGGCAAAAAGCCTGGAAAAGTTAATGGGAAGAAAATCGAGTTT
ATCACGGCTGGTGGCAGGACTTCAGCCTTTGTGCCGGACCTACAAAAGATGGTGGGAGCT
GAATCTGCAAAAGCAGCAGGTAAAAGGCAGCAGGTCAAAGTTCAGAGAGTCAAGCATAAC
GATAGTGATGGTGAAGACGAGGAACCAGAAATTGAAGAGGCAGAAGCTGGGAAATCAAAG
GGGAAGCGGCGTGGGACAGATAATAAGAGAGCTTCTACTAACAAGAAGTTGAAGGGAAGC
AACGGTGACAATGATGAAAATGATAATGATAATGATGAAGGTCTAAAGAATCCTTCTGAA
AAAGCAAAACAAAGTAGGAGCTCCAAGGGAAAAGGTGGTAATCAAGAGAAGAAAGCCAGA
GCAAATATGGCTGCAAAAAGAAAACTAGAGGAAAGTGGTGATGATGAAGATGATGACGGT
AGTGAGGGTGATGATGATAATGAAGGGGGCAAGGATCGCAAGCTTTCTAGTAAAACACAA
TCAAAGGGGAAGAAGACCACCAAGCGAACGGCTGAACCAAGGCAGACTAGGAATAAGCTG
TCCAATAAGCACAAGTAA

Peptide Sequence

PEP ID

XP_016507217.1
PEP Infomation

PREDICTED: formamidopyrimidine-DNA glycosylase-like isoform X2 [Nicotiana tabacum]
Sequence

MPELPEVEAARRAIEDHCVGKKIVKAIIADDPKVIDGVSLDDFRASLEGKTIVAANRKGK
NMWIELDSPPFPTFQFGMAGAIYIKGVAVTKYKRSAVKDDDEWPSKYSKVFLELDDGLEL
SFTDKRRFARVRSLKNPVSVPPISELGPDALLEPMTVDEFYKAFSKKKIGVKALLLDQSF
ISGIGNWIADEVLYQARIHPMQTASSISKEDCATLLKCIYEVTEFAVEVDADCSRFPSEW
LFHYRWGKKPGKVNGKKIEFITAGGRTSAFVPDLQKMVGAESAKAAGKRQQVKVQRVKHN
DSDGEDEEPEIEEAEAGKSKGKRRGTDNKRASTNKKLKGSNGDNDENDNDNDEGLKNPSE
KAKQSRSSKGKGGNQEKKARANMAAKRKLEESGDDEDDDGSEGDDDNEGGKDRKLSSKTQ
SKGKKTTKRTAEPRQTRNKLSNKHK

Transcript Sequence

Gene sequence data has not been registered.